Cream Cheese Everything Bagel Muffins

Featured in: Sunrise Spoonfuls

These muffins feature a tender crumb, enhanced with the classic flavors of everything bagel seasoning. A creamy cheese center adds richness to each bite, while fresh chives and garlic powder deliver aromatic complexity. Quick to prepare and easy to bake, they offer a satisfying vegetarian option for breakfast or snack time. Enjoy warm for the ultimate experience, or serve with smoked salmon and fresh herbs for a festive brunch spread.

Updated on Thu, 30 Oct 2025 12:00:00 GMT
Fluffy cream cheese everything bagel muffins topped with savory seasoning, perfect for brunch.  Save It
Fluffy cream cheese everything bagel muffins topped with savory seasoning, perfect for brunch. | sunnyspoonful.com

Fluffy, savory muffins packed with classic everything bagel flavors and a creamy cheese center are perfect for breakfast or brunch. These Cream Cheese Everything Bagel Muffins make mornings a little more special with every bite.

I wanted a way to enjoy the beloved flavors of an everything bagel with cream cheese without needing a toaster or extra time in the morning. After testing several batches, this muffin recipe nails that savory, pillowy crumb and rich center every time.

Ingredients

  • All-purpose flour: 2 cups (250 g)
  • Baking powder: 2 tsp
  • Baking soda: 1/2 tsp
  • Salt: 1/2 tsp
  • Eggs: 2 large
  • Buttermilk: 3/4 cup (180 ml)
  • Vegetable oil: 1/4 cup (60 ml)
  • Unsalted butter (melted): 2 tbsp
  • Honey: 1 tbsp
  • Cream cheese (softened): 8 oz (225 g)
  • Fresh chives (optional): 1 tbsp, chopped
  • Garlic powder: 1/4 tsp
  • Everything bagel seasoning: 2 tbsp
  • Sesame seeds (optional): 1 tbsp

Instructions

Prepare oven and pan:
Preheat your oven to 375°F (190°C). Line a 12-cup muffin tin with paper liners or lightly grease with nonstick spray.
Combine dry ingredients:
In a medium bowl, whisk together flour, baking powder, baking soda, and salt.
Mix wet ingredients:
In a large bowl, beat the eggs, buttermilk, vegetable oil, melted butter, and honey until combined.
Make the batter:
Add the dry ingredients to the wet ingredients and stir until just combined. Do not overmix.
Prepare cheese filling:
In a small bowl, mix the softened cream cheese with chives (if using) and garlic powder until smooth.
Assemble muffins:
Fill each muffin cup halfway with batter. Place about 1 tablespoon of the cream cheese mixture in the center of each, then cover with remaining batter.
Add topping:
Sprinkle the tops with everything bagel seasoning and sesame seeds.
Bake:
Bake for 20–22 minutes, or until the tops are golden and a toothpick inserted into the muffin part comes out clean.
Cool and serve:
Cool in the pan for 5 minutes, then transfer to a wire rack to cool slightly. Enjoy warm or at room temperature.
Savory muffins with a creamy center, infused with everything bagel flavors and spices.  Save It
Savory muffins with a creamy center, infused with everything bagel flavors and spices. | sunnyspoonful.com

My family loves these muffins fresh from the oven, sometimes with a little extra sprinkle of chives. We enjoy them together on lazy weekend mornings where everyone reaches for seconds.

Required Tools

12-cup muffin tin, mixing bowls, electric mixer or whisk, measuring cups and spoons, rubber spatula

Allergen Information

Contains wheat (gluten), eggs, milk (dairy), and sesame seeds in topping. Always double-check everything bagel seasoning for other potential allergens.

Nutritional Information

Each muffin contains about 210 calories, 12 g total fat, 21 g carbohydrates, and 5 g protein.

Warm, cheesy everything bagel muffins served with fresh herbs and sliced salmon. Save It
Warm, cheesy everything bagel muffins served with fresh herbs and sliced salmon. | sunnyspoonful.com

Bake and enjoy these muffins for breakfast or brunch. The creamy cheese center and everything topping always impress guests.

Recipe FAQs

Can I substitute the buttermilk?

Yes, Greek yogurt or milk with a splash of lemon juice works as a flavorful replacement for buttermilk.

How do I prevent the cheese filling from leaking?

Ensure batter covers the cheese filling on all sides and avoid overfilling the muffin cups to maintain structure.

Can these muffins be made ahead of time?

Absolutely. Store cooled muffins in an airtight container at room temperature for up to 2 days or refrigerate for longer freshness.

What’s the best way to serve them?

Serve warm for the creamiest center or pair with smoked salmon and herbs for a special brunch presentation.

Are there nut-free options?

Yes, just check your bagel seasoning for added nuts. The base ingredients do not contain nuts.

Can I add extra cheese to the batter?

Yes, incorporating shredded cheddar or similar cheese into the batter adds more richness and flavor depth.

Cream Cheese Everything Bagel Muffins

Fluffy muffins with bagel seasoning and creamy cheese, perfect for breakfast or brunch.

Prep Time
15 mins
Cook Time
22 mins
Total Duration
37 mins
Authored by Lana Bright

Recipe Type Sunrise Spoonfuls

Skill Level Easy

Cuisine Style American

Recipe Yield 12 Serving Size

Diet Preferences Vegetarian-Friendly

What You'll Need

Dry Ingredients

01 2 cups all-purpose flour
02 2 teaspoons baking powder
03 1/2 teaspoon baking soda
04 1/2 teaspoon salt

Wet Ingredients

01 2 large eggs
02 3/4 cup buttermilk
03 1/4 cup vegetable oil
04 2 tablespoons unsalted butter, melted
05 1 tablespoon honey

Cheese Filling

01 8 ounces cream cheese, softened
02 1 tablespoon chopped fresh chives (optional)
03 1/4 teaspoon garlic powder

Topping

01 2 tablespoons everything bagel seasoning
02 1 tablespoon sesame seeds (optional)

Directions

Step 01

Prepare Muffin Tin: Preheat oven to 375°F and line a 12-cup muffin pan with paper liners or lightly coat with nonstick spray.

Step 02

Combine Dry Ingredients: In a medium bowl, whisk together all-purpose flour, baking powder, baking soda, and salt until uniform.

Step 03

Blend Wet Ingredients: In a large bowl, beat eggs, buttermilk, vegetable oil, melted butter, and honey until fully combined.

Step 04

Mix Batter: Fold dry ingredients into wet ingredients and stir gently until just combined; avoid overmixing.

Step 05

Prepare Cream Cheese Filling: In a small bowl, blend softened cream cheese with chives (if using) and garlic powder until smooth.

Step 06

Assemble Muffins: Fill each muffin cup halfway with batter. Place 1 tablespoon cream cheese mixture in center of each, then cover with remaining batter.

Step 07

Add Toppings: Sprinkle muffin tops evenly with everything bagel seasoning and sesame seeds for crunch.

Step 08

Bake: Bake for 20–22 minutes until tops are golden and a toothpick inserted into the muffin portion comes out clean.

Step 09

Cool Muffins: Let muffins cool in pan for 5 minutes, then transfer to wire rack to cool slightly; serve warm or at room temperature.

Tools You'll Need

  • 12-cup muffin tin
  • Mixing bowls
  • Electric mixer or whisk
  • Measuring cups and spoons
  • Rubber spatula

Allergy Information

Review each ingredient to identify potential allergens, and consult a healthcare professional if you're unsure.
  • Contains wheat (gluten), eggs, milk (dairy), sesame seeds.
  • Review everything bagel seasoning ingredients for any supplemental allergens.

Nutrition Details (Per Serving)

This nutritional data is for reference only and isn't a substitute for medical advice.
  • Caloric Value: 210
  • Fats: 12 grams
  • Carbohydrates: 21 grams
  • Proteins: 5 grams